Ruck, C.L. & Shivji, M.S. & Jabado, R.W. & Bernard, A.M. (2024)
Cross ocean-basin population genetic dynamics in a pelagic top predator of high conservation concern, the oceanic whitetip shark, Carcharhinus longimanus. Conservation Genetics, in press
DOI: 10.1007/s10592-023-01596-1

Stanhope, M.J. & Ceres, K.M. & Sun, Q. & Wang, M.H. & Zehr, J.D. & Marra, N.J. & Wilder, A.P. & Zou, C. & Bernard, A.M. & Pavinski-Bitar, P. & Lokey, M.G. & Shivji, M.S. (2023)
Genomes of endangered great hammerhead and shortfin mako sharks reveal historic population declines and high levels of inbreeding in great hammerhead. Iscience, 26(1), Article 105815
DOI: 10.1016/j.isci.2022.105815

Mehlrose, M.R. & Bernard, A.M. & Finnegan, K.A. & Krausfeldt, L.E. & Lopez, J.V. & Shivji, M.S. (2022)
Three complete mitochondrial genomes of shortfin mako sharks, Isurus oxyrinchus, from the Atlantic and Pacific Oceans. Mitochondrial DNA Part B, 7(4), 652–654
DOI: 10.1080/23802359.2022.2060768

Harned, S.P. & Bernard, A.M. & Salinas-de-Leon, P. & Mehlrose, M.R. & Suarez, J. & Robles, Y. & Bessudo, S. & Ladino, F. & Garo, A.L. & Zanella, I. & Feldheim, K.A. & Shivji, M.S. (2022)
Genetic population dynamics of the critically endangered scalloped hammerhead shark (Sphyrna lewini) in the Eastern Tropical Pacific. Ecology and Evolution, 12(12), Article e9642
DOI: 10.1002/ece3.9642

Sort, M. & Manuzzi, A. & Jimenez-Mena, B. & Ovenden, J.R. & Holmes, B.J. & Bernard, A.M. & Shivji, M.S. & Meldrup, D. & Bennett, M.B. & Nielsen, E.E. (2021)
Come together: calibration of tiger shark (Galeocerdo cuvier) microsatellite databases for investigating global population structure and assignment of historical specimens. Conservation Genetics Resources, 13, 209–220
DOI: 10.1007/s12686-021-01197-5

Bernard, A.M. & Finnegan, K.A. & Bitar, P.P. & Stanhope, M.J. & Shivji, M.S. (2021)
Genomic Assessment of Global Population Structure in a Highly Migratory and Habitat Versatile Apex Predator, the Tiger Shark (Galeocerdo cuvier). Journal of Heredity, 112, 497–507
DOI: 10.1093/jhered/esab046

Patel, E. & Bernard, A.M. & Mehlrose, M. & Harned, S. & Finnegan, K.A. & Fitzpatrick, C.K. & Lea, J.S. & Shivji, M.S. (2020)
The complete mitochondrial genome of a gray reef shark, Carcharhinus amblyrhynchos (Carcharhiniformes: Carcharhinidae), from the Western Indian Ocean. Mitochondrial DNA Part B, 5(3), 3516–3517
DOI: 10.1080/23802359.2020.1827064

Bernard, A.M. & Richards, V.P. & Stanhope, M.J. & Shivji, M.S. (2018)
Transcriptome-Derived Microsatellites Demonstrate Strong Genetic Differentiation in Pacific White Sharks. Journal of Heredity, 109(7), 771–779
DOI: 10.1093/jhered/esy045

Steinke, D. & Bernard, A.M. & Horn, R.L. & Hilton, P. & Hanner, R. & Shivji, M.S. (2017)
DNA analysis of traded shark fins and mobulid gill plates reveals a high proportion of species of conservation concern. Scientific Reports, 7, Article 9505
DOI: 10.1038/s41598-017-10123-5

Bernard, A.M. & Horn, R.L. & Chapman, D.D. & Feldheim, K.A. & Garla, R.C. & Brooks, E.J. & Gore, M.A. & Shivji, M.S. (2017)
Genetic connectivity of a coral reef ecosystem predator: the population genetic structure and evolutionary history of the Caribbean reef shark (Carcharhinus perezi). Journal of Biogeography, 44(11), 2488–2500
DOI: 10.1111/jbi.13062

Bernard, A.M. & Feldheim, K.A. & Heithaus, M.R. & Wintner, S.P. & Wetherbee, B.M. & Shivji, M.S. (2016)
Global Population Genetic Dynamics of a Highly Migratory, Apex Predator Shark. Molecular Ecology, 25(21), 5312–5329
DOI: 10.1111/mec.1384

Clarke, C.R. & Karl, S.A. & Horn, R.L. & Bernard, A.M. & Lea, J.S. & Hazin, F.H. & Prodöhl, P.A. & Shivji, M.S. (2015)
Global mitochondrial DNA phylogeography and population structure of the silky shark, Carcharhinus falciformis. Marine Biology, 162(5), 945–955
DOI: 10.1007/s00227-015-2636-6

Bernard, A.M. & Feldheim, K.A. & Shivji, M.S. (2015)
Isolation and characterization of polymorphic microsatellite markers from a globally distributed marine apex predator, the tiger shark (Galeocerdo cuvier). Conservation Genetics Resources, 7(2), 509–511
DOI: 10.1007/s12686-014-0408-0

Chapman, D.D. & Wintner, S.P. & Abercrombie, D.L. & Ashe, J. & Bernard, A.M. & Shivji, M.S. & Feldheim, K.A. (2013)
The behavioural and genetic mating system of the sand tiger shark, Carcharias taurus, an intrauterine cannibal. Biology Letters, 9(3), Article 20130003
DOI: 10.1098/rsbl.2013.0003