A report on the fishes of Massachusetts. Boston Journal of Natural History, 2 (3–4), Art. XII: 289–558
Zoology of New-York, or the New-York fauna; comprising detailed descriptions of all the animals hitherto observed within the state of New-York, with brief notices of those occasionally found near its borders, and accompanied by appropriate illustrations. Part IV. Fishes. Zoology of New–York, or the New–York fauna; ...: i–xv + 1–415, Pls. 1–79. [Plates in separate volume; fishes, Pls. 1–79 [most in color]
Catalogue of the fishes of Connecticut, arranged according to their natural families. American Journal of Science, 47: 55–80
A synopsis of the fishes of North America. Memoirs of the American Academy of Arts and Sciences, n.s., 2: 253–550
Catalogue of the fishes in the British Museum. London, British Museum (Natural History). Vol. 8: 549 p.
Report on the shore fishes procured during the voyage of H. M. S. Challenger in the years 1873-1876. Zoology, 1 (6): 1–82, Pls. 1–32.
Report on the fishes observed in Great Egg Harbor Bay, New Jersey, during the summer of 1887. Bulletin of the United States Fish Commission, 7: 129–154, 3 pls.
Report on the pelagic fishes collected by H.M.S. Challenger during the years 1873-76 In: Report on the Scientific Results of the voyage of H.M.S. CHALLENGER during the years 1873–76, Zoology. London, Vol. 78
A monograph on the Tetraphyllidea with notes on related cestodes. Memoirs of the Liverpool School of Tropical Medicine (New Series) 2: 1–368